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Integration of metabolite and transcriptome profiles of cultivated and wild rice to unveil gene regulatory networks and key genes determining rice source and sink strength

Crossref DOI link: https://doi.org/10.1007/s10142-025-01606-0

Published Online: 2025-05-01

Published Print: 2025-12

Update policy: https://doi.org/10.1007/springer_crossmark_policy

Authors

Singh, Anuradha

Mathan, Jyotirmaya

Dwivedi, Aditi

Rani, Ruchi

Ranjan, Aashish
Funding

Funding for this research was provided by:

Department of Biotechnology, Ministry of Science and Technology, India (BT/09/IYBA/2015/01; BT/Ag/Network/Rice/2019-20)
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Text and Data Mining valid from 2025-05-01

Version of Record valid from 2025-05-01
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Article History

Received: 14 January 2025

Revised: 13 April 2025

Accepted: 24 April 2025

First Online: 1 May 2025

Declarations

:

: The authors declare no competing interests.

: The study identifies gene regulatory networks involving key photosynthetic and sugar metabolism genes along with transcription factors and phytohormone-related genes that determine the source and sink strength differences across cultivated and wild rice. The study not only provides a comprehensive resource for detailed functional characterization of the identified hub genes and transcription factors but also would be instrumental for optimizing rice source-sink dynamics toward improved crop performance.

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