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Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm

Crossref DOI link: https://doi.org/10.1186/s12864-018-5082-2

Published Online: 2018-09-25

Published Print: 2018-12

Update policy: https://doi.org/10.1007/springer_crossmark_policy

Authors

Romero, Juan P.

Ortiz-Estévez, María

Muniategui, Ander

Carrancio, Soraya

de Miguel, Fernando J.

Carazo, Fernando

Montuenga, Luis M.

Loos, Remco

Pío, Rubén

Trotter, Matthew W. B.

Rubio, Angel http://orcid.org/0000-0002-3274-2450
Funding

Funding for this research was provided by:

Eusko Jaurlaritza (PRE_2016_1_0194)

Secretaría de Estado de Investigación, Desarrollo e Innovación (PI14/00806)

Secretaría de Estado de Investigacion, Desarrollo e Innovacion (PI14/00806)

Fundación Científica Asociación Española Contra el Cáncer (GCB14-2170)
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Article History

Received: 22 March 2018

Accepted: 17 September 2018

First Online: 25 September 2018

Ethics approval and consent to participate

: Not applicable as cell lines were obtained from commercially available suppliers. Cell lines MDA-MB-231 and MDA-MB-468 were obtained from ATCC (Manassas, VA) with identification numbers HTB-26 and HT-132 respectively and cell line SUM149 was purchased from Asterand plc (Detroit, MI).

: Not applicable.

: A. Rubio, J.P. Romero and F. Carazo are being funded by Affymetrix in an independent project. The authors declare that they have no competing interests.

: Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.