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Usability of reference-free transcriptome assemblies for detection of differential expression: a case study on Aethionema arabicum dimorphic seeds

Crossref DOI link: https://doi.org/10.1186/s12864-019-5452-4

Published Online: 2019-01-30

Published Print: 2019-12

Update policy: https://doi.org/10.1007/springer_crossmark_policy

Authors

Wilhelmsson, Per K. I. https://orcid.org/0000-0002-8578-3387
Chandler, Jake O. https://orcid.org/0000-0003-0955-9241
Fernandez-Pozo, Noe

Graeber, Kai

Ullrich, Kristian K.

Arshad, Waheed https://orcid.org/0000-0002-9413-2279
Khan, Safina

Hofberger, Johannes A.

Buchta, Karl

Edger, Patrick P.

Pires, J. Chris

Schranz, M. Eric

Leubner-Metzger, Gerhard https://orcid.org/0000-0002-6045-8713
Rensing, Stefan A. https://orcid.org/0000-0002-0225-873X
Funding

Funding for this research was provided by:

Deutsche Forschungsgemeinschaft (RE 1697/8–1)

Netherlands Organization for International Cooperation in Higher Education (849.13.004)

Biotechnology and Biological Sciences Research Council (BB/M00192X/1 BB/M000583/1)

Natural Environment Research Council (NE/L002485/1)
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Article History

Received: 16 May 2018

Accepted: 14 January 2019

First Online: 30 January 2019

Ethics approval and consent to participate

: The source of the <i>Ae. arabicum</i> seeds were accessions 0000309 (obtained from Kew’s Millennium Seed Bank) and ES1020 (obtained from Eric Schranz, Wageningen) []. This study complies with institutional, national, and international guidelines.

: Not applicable

: The authors declare that they have no competing interests.

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